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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
3987

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SNCAIP HGNC:11139 (HGNC)
9627 (Entrez Gene)
603779 (OMIM)
Chr5 q23.2 Chr5:122311558-122464099 (+)
GRCh38
Parkinson Disease, Late-Onset; PD
Q9Y6H5 (UniProt | EBI)
NM_005460 (RefSeq)
mouse Sncaip MGI:1915097 (MGI)
67847 (Entrez Gene)
Gene Tree
VISTA-Point
Chr18 28.27 cM Chr18:52767709-52915935 (+)
GRCm38
OTTMUSG00000042341 (VEGA)
OTTMUSP00000062485 (VEGA)
OTTMUST00000111559 (VEGA)
rat Sncaip 307309 (Entrez Gene)
Chr18 q11 NP_001100849 (RefSeq)
NM_001107379 (RefSeq)
rhesus macaque SNCAIP 700372 (Entrez Gene)
Chr6 XP_001090698 (RefSeq)
cattle SNCAIP 540156 (Entrez Gene)
Chr7 NP_001192707 (RefSeq)
NM_001205778 (RefSeq)
dog SNCAIP 481479 (Entrez Gene)
Chr11 XP_538600 (RefSeq)
chicken SNCAIP 426796 (Entrez Gene)
ChrZ XP_424409 (RefSeq)
zebrafish zgc:172291 796993 (Entrez Gene)
Chr8 NP_001107108 (RefSeq)
NM_001113636 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory