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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SFTPA1 HGNC:10798 (HGNC)
653509 (Entrez Gene)
178630 (OMIM)
HGNC homology
Chr10 q22.3 Chr10:79610939-79615443 (+)
idiopathic pulmonary fibrosis
Q8IWL2 (UniProt | EBI)
NM_001093770 (RefSeq)
mouse Sftpa1 MGI:109518 (MGI)
20387 (Entrez Gene)
Gene Tree
HGNC homology
Chr14 22.36 cM Chr14:41131782-41136452 (+)
OTTMUSG00000035515 (VEGA)
OTTMUSP00000050031 (VEGA)
OTTMUST00000090956 (VEGA)
rat Sftpa1 24773 (Entrez Gene)
Chr16 p14 P08427 (UniProt | EBI)
NM_001270647 (RefSeq)
chimpanzee SFTPA1 740759 (Entrez Gene)
Chr10 XP_001152660 (RefSeq)
cattle SFTPA1 407213 (Entrez Gene)
Chr28 Q6RXL1 (UniProt | EBI)
NM_001077838 (RefSeq)
dog LOC610540 610540 (Entrez Gene)
Chr4 XP_003434532 (RefSeq)
chicken SFTPA1 423630 (Entrez Gene)
Chr6 NP_001034255 (RefSeq)
NM_001039166 (RefSeq)
macaque, rhesus SFTPA1 574108 (Entrez Gene)
Chr9 Q9TUC5 (UniProt | EBI)
NM_001195376 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.11
The Jackson Laboratory