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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
392

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SOD1 HGNC:11179 (HGNC)
6647 (Entrez Gene)
147450 (OMIM)
Chr21 q22.11 Chr21:31659622-31668931 (+)
GRCh38
Amyotrophic Lateral Sclerosis 1; ALS1
P00441 (UniProt | EBI)
NM_000454 (RefSeq)
mouse Sod1 MGI:98351 (MGI)
20655 (Entrez Gene)
Gene Tree
VISTA-Point
Chr16 51.56 cM Chr16:90220742-90226322 (+)
GRCm38
Glaucoma, Normal Tension, Susceptibility to
ENSMUSG00000022982 (Ensembl Gene Model)
ENSMUSP00000023707 (Ensembl)
ENSMUST00000023707 (Ensembl)
rat Sod1 24786 (Entrez Gene)
Chr11 q11 P07632 (UniProt | EBI)
NM_017050 (RefSeq)
chimpanzee SOD1 449637 (Entrez Gene)
Chr21 P60052 (UniProt | EBI)
NM_001009025 (RefSeq)
rhesus macaque SOD1 574096 (Entrez Gene)
Chr3 Q8HXQ0 (UniProt | EBI)
NM_001032804 (RefSeq)
dog SOD1 403559 (Entrez Gene)
Chr31 Q8WNN6 (UniProt | EBI)
NM_001003035 (RefSeq)
chicken SOD1 395938 (Entrez Gene)
Chr1 P80566 (UniProt | EBI)
NM_205064 (RefSeq)
zebrafish sod1 30553 (Entrez Gene)
Chr10 O73872 (UniProt | EBI)
NM_131294 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory