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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
390

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC10A2 HGNC:10906 (HGNC)
6555 (Entrez Gene)
601295 (OMIM)
Chr13 q33 Chr13:103043998-103066846 (-)
GRCh38
Bile Acid Malabsorption, Primary; PBAM
Q12908 (UniProt | EBI)
NM_000452 (RefSeq)
mouse Slc10a2 MGI:1201406 (MGI)
20494 (Entrez Gene)
Gene Tree
VISTA-Point
Chr8 2.16 cM Chr8:5085623-5105232 (-)
GRCm38
20494 (NCBI Gene Model)
P70172 (UniProt | EBI)
NM_011388 (RefSeq)
rat Slc10a2 29500 (Entrez Gene)
Chr16 q12.5 Q62633 (UniProt | EBI)
NM_017222 (RefSeq)
chimpanzee SLC10A2 467318 (Entrez Gene)
Chr13 XP_522716 (RefSeq)
rhesus macaque SLC10A2 702376 (Entrez Gene)
Chr17 XP_001095212 (RefSeq)
cattle SLC10A2 525823 (Entrez Gene)
Chr12 XP_604179 (RefSeq)
dog SLC10A2 403448 (Entrez Gene)
Chr22 NP_001002968 (RefSeq)
NM_001002968 (RefSeq)
chicken SLC10A2 428018 (Entrez Gene)
Chr1 XP_425589 (RefSeq)
western clawed frog LOC100487141 100487141 (Entrez Gene)
ChrUN XP_002933069 (RefSeq)
zebrafish slc10a2 393329 (Entrez Gene)
Chr9 NP_956652 (RefSeq)
NM_200358 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/16/2014
MGI 5.19
The Jackson Laboratory