About   Help   FAQ
Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
387

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
select all deselect all Go
human RAG1 HGNC:9831 (HGNC)
5896 (Entrez Gene)
179615 (OMIM)
Chr11 p13 Chr11:36510372-36579762 (+)
GRCh38
Alpha/Beta T-Cell Lymphopenia with Gamma/Delta T-Cell Expansion, Severe Cytomegalovirus Infection, and Autoimmunity
Combined Cellular and Humoral Immune Defects with Granulomas; CCHIDG
Omenn Syndrome
Severe Combined Immunodeficiency, Autosomal Recessive, T Cell-Negative, B Cell-Negative, Nk Cell-Positive
P15918 (UniProt | EBI)
NM_000448 (RefSeq)
mouse Rag1 MGI:97848 (MGI)
19373 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 53.88 cM Chr2:101638282-101649501 (-)
GRCm38
OTTMUSG00000014584 (VEGA)
OTTMUSP00000015477 (VEGA)
OTTMUST00000034580 (VEGA)
rat Rag1 84600 (Entrez Gene)
Chr3 q31 NP_445920 (RefSeq)
NM_053468 (RefSeq)
chimpanzee RAG1 466489 (Entrez Gene)
Chr11 XP_001154240 (RefSeq)
rhesus macaque RAG1 697322 (Entrez Gene)
Chr14 NP_001253701 (RefSeq)
NM_001266772 (RefSeq)
cattle RAG1 506302 (Entrez Gene)
Chr15 XP_872414 (RefSeq)
dog RAG1 483420 (Entrez Gene)
Chr18 XP_540538 (RefSeq)
chicken RAG1 423164 (Entrez Gene)
Chr5 P24271 (UniProt | EBI)
NM_001031188 (RefSeq)
western clawed frog rag1 100145555 (Entrez Gene)
ChrUN XP_002937338 (RefSeq)
NM_001126986 (RefSeq)
zebrafish rag1 30663 (Entrez Gene)
Chr25 O13033 (UniProt | EBI)
NM_131389 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
09/23/2014
MGI 5.19
The Jackson Laboratory