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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
38258

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC19A2 HGNC:10938 (HGNC)
10560 (Entrez Gene)
603941 (OMIM)
Chr1 q23.3 Chr1:169463909-169485970 (-)
GRCh38
Thiamine-Responsive Megaloblastic Anemia Syndrome; TRMA
O60779 (UniProt | EBI)
NM_006996 (RefSeq)
mouse Slc19a2 MGI:1928761 (MGI)
116914 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 71.56 cM Chr1:164249046-164265385 (+)
GRCm38
Thiamine-Responsive Megaloblastic Anemia Syndrome; TRMA
OTTMUSG00000031583 (VEGA)
OTTMUSP00000041576 (VEGA)
OTTMUST00000078223 (VEGA)
rat Slc19a2 289175 (Entrez Gene)
Chr13 q22 NP_001025195 (RefSeq)
NM_001030024 (RefSeq)
chimpanzee SLC19A2 469575 (Entrez Gene)
Chr1 XP_524958 (RefSeq)
rhesus macaque SLC19A2 700684 (Entrez Gene)
Chr1 NP_001244452 (RefSeq)
NM_001257523 (RefSeq)
cattle SLC19A2 532860 (Entrez Gene)
Chr16 NP_001192939 (RefSeq)
NM_001206010 (RefSeq)
dog SLC19A2 490353 (Entrez Gene)
Chr7 XP_850843 (RefSeq)
chicken SLC19A2 427957 (Entrez Gene)
Chr1 XP_425529 (RefSeq)
western clawed frog LOC100489793 100489793 (Entrez Gene)
ChrUN XP_002935829 (RefSeq)
zebrafish slc19a2 569085 (Entrez Gene)
Chr6 XP_005168792 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory