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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
38218

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SUB1 HGNC:19985 (HGNC)
10923 (Entrez Gene)
600503 (OMIM)
SUB1 (MyGene.info)
HGNC homology
Chr5 p13.3 Chr5:32531778-32604079 (+)
GRCh38.p7
P53999 (UniProt | EBI)
NM_006713 (RefSeq)
mouse Sub1 MGI:104811 (MGI)
20024 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr15 5.9 cM Chr15:11981336-11996038 (-)
GRCm38
20024 (NCBI Gene Model)
P11031 (UniProt | EBI)
NM_011294 (RefSeq)
rat Sub1 192269 (Entrez Gene)
Chr2 q16 Q63396 (UniProt | EBI)
NM_001009618 (RefSeq)
chimpanzee SUB1 741583 (Entrez Gene)
Chr5 XP_003310805 (RefSeq)
cattle SUB1 533984 (Entrez Gene)
Chr20 NP_001098877 (RefSeq)
NM_001105407 (RefSeq)
dog SUB1 479283 (Entrez Gene)
Chr4 XP_536425 (RefSeq)
chicken SUB1 427425 (Entrez Gene)
ChrZ Q5ZK63 (UniProt | EBI)
NM_001008479 (RefSeq)
SUB1L2 777191 (Entrez Gene)
ChrUN
zebrafish sub1a 553561 (Entrez Gene)
Chr10 NP_001268927 (RefSeq)
NM_001281998 (RefSeq)
sub1b 436778 (Entrez Gene)
Chr5 NP_001002505 (RefSeq)
NM_001002505 (RefSeq)
frog, western clawed sub1 448190 (Entrez Gene)
Chr1 NP_001004871 (RefSeq)
NM_001004871 (RefSeq)
macaque, rhesus SUB1 701045 (Entrez Gene)
Chr6 NP_001248140 (RefSeq)
NM_001261211 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
06/23/2020
MGI 6.15
The Jackson Laboratory