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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
3819

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CSTA HGNC:2481 (HGNC)
1475 (Entrez Gene)
184600 (OMIM)
Chr3 q21 Chr3:122325164-122341969 (+)
GRCh38
Exfoliative Ichthyosis, Autosomal Recessive, Ichthyosis Bullosa of Siemens-Like
P01040 (UniProt | EBI)
NM_005213 (RefSeq)
mouse 2010005H15Rik MGI:1924020 (MGI)
76770 (Entrez Gene)
Gene Tree
VISTA-Point
Chr16 25.44 cM Chr16:36253046-36257372 (+)
GRCm38
ENSMUSG00000095620 (Ensembl Gene Model)
ENSMUSP00000067712 (Ensembl)
ENSMUST00000063539 (Ensembl)
Csta1 MGI:3524930 (MGI)
209294 (Entrez Gene)
Gene Tree
VISTA-Point
Chr16 25.43 cM Chr16:36119946-36131241 (-)
GRCm38
OTTMUSG00000026729 (VEGA)
OTTMUSP00000033075 (VEGA)
OTTMUST00000066119 (VEGA)
Gm5483 MGI:3645124 (MGI)
433016 (Entrez Gene)
Gene Tree
VISTA-Point
Chr16 25.43 cM Chr16:36184212-36188111 (+)
GRCm38
433016 (NCBI Gene Model)
NP_001076016 (RefSeq)
NM_001082547 (RefSeq)
rat Csta 288067 (Entrez Gene)
Chr11 q22 NP_001099346 (RefSeq)
NM_001105876 (RefSeq)
chimpanzee CSTA 746075 (Entrez Gene)
Chr3 XP_001166441 (RefSeq)
rhesus macaque CSTA 714547 (Entrez Gene)
Chr2 NP_001245071 (RefSeq)
NM_001258142 (RefSeq)
cattle CSTA 617114 (Entrez Gene)
Chr1 P80416 (UniProt | EBI)
NM_001167824 (RefSeq)
dog CSTA 488008 (Entrez Gene)
Chr33 XP_545130 (RefSeq)
chicken CSTA 418268 (Entrez Gene)
Chr1 XP_416493 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory