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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
38116

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human MMP11 HGNC:7157 (HGNC)
4320 (Entrez Gene)
185261 (OMIM)
Chr22 q11.23 Chr22:23772849-23784316 (+)
GRCh38
P24347 (UniProt | EBI)
NM_005940 (RefSeq)
mouse Mmp11 MGI:97008 (MGI)
17385 (Entrez Gene)
Gene Tree
VISTA-Point
Chr10 38.62 cM Chr10:75923222-75932502 (-)
GRCm38
OTTMUSG00000031859 (VEGA)
OTTMUSP00000042090 (VEGA)
OTTMUST00000078994 (VEGA)
rat Mmp11 25481 (Entrez Gene)
Chr20 p12 Q499S5 (UniProt | EBI)
NM_012980 (RefSeq)
chimpanzee MMP11 458701 (Entrez Gene)
Chr22 XP_515022 (RefSeq)
rhesus macaque MMP11 699067 (Entrez Gene)
Chr10 XP_001083910 (RefSeq)
cattle MMP11 539109 (Entrez Gene)
Chr17 XP_584877 (RefSeq)
dog MMP11 486408 (Entrez Gene)
Chr26 NP_001229661 (RefSeq)
NM_001242732 (RefSeq)
chicken LOC101751203 101751203 (Entrez Gene)
Chr15 XP_004934559 (RefSeq)
western clawed frog mmp11 100493314 (Entrez Gene)
ChrUN XP_002931938 (RefSeq)
zebrafish mmp11a 563753 (Entrez Gene)
Chr8 XP_692205 (RefSeq)
mmp11b 565793 (Entrez Gene)
Chr21 XP_694153 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory