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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
38105

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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mouse Irx5 MGI:1859086 (MGI)
54352 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr8 44.93 cM Chr8:92357796-92361456 (+)
GRCm38
54352 (NCBI Gene Model)
Q9JKQ4 (UniProt | EBI)
NM_018826 (RefSeq)
rat Irx5 498918 (Entrez Gene)
Chr19 p11 NP_001025215 (RefSeq)
NM_001030044 (RefSeq)
chimpanzee IRX5 454093 (Entrez Gene)
Chr16 XP_510970 (RefSeq)
cattle IRX5 532896 (Entrez Gene)
Chr18 NP_001179673 (RefSeq)
NM_001192744 (RefSeq)
dog IRX5 487276 (Entrez Gene)
Chr2 XP_005617604 (RefSeq)
chicken IRX5 770775 (Entrez Gene)
Chr11 XP_015147857 (RefSeq)
zebrafish irx5a 573346 (Entrez Gene)
Chr7 NP_001038692 (RefSeq)
NM_001045227 (RefSeq)
frog, western clawed irx5 100038201 (Entrez Gene)
Chr4 Q4LDQ3 (UniProt | EBI)
NM_001171927 (RefSeq)
macaque, rhesus IRX5 697968 (Entrez Gene)
Chr20 XP_001086980 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
09/08/2020
MGI 6.15
The Jackson Laboratory