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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
38082

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TARBP1 HGNC:11568 (HGNC)
6894 (Entrez Gene)
605052 (OMIM)
TARBP1 (MyGene.info)
HGNC homology
Chr1 q42.2 Chr1:234391313-234479174 (-)
GRCh38.p7
Q13395 (UniProt | EBI)
NM_005646 (RefSeq)
mouse Tarbp1 MGI:4936930 (MGI)
212728 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr8 74.1 cM Chr8:126425329-126475065 (-)
GRCm38
ENSMUSG00000090290 (Ensembl Gene Model)
ENSMUSP00000129815 (Ensembl)
ENSMUST00000170518 (Ensembl)
rat Tarbp1 679346 (Entrez Gene)
Chr19 XP_017443421 (RefSeq)
chimpanzee TARBP1 457830 (Entrez Gene)
Chr1 XP_009439952 (RefSeq)
cattle TARBP1 535018 (Entrez Gene)
Chr28 XP_024842683 (RefSeq)
dog TARBP1 479200 (Entrez Gene)
Chr4 XP_013968185 (RefSeq)
chicken TARBP1 421517 (Entrez Gene)
Chr3 XP_025004795 (RefSeq)
zebrafish si:dkey-85a20.4 566303 (Entrez Gene)
Chr13 XP_017214336 (RefSeq)
frog, western clawed tarbp1 100493389 (Entrez Gene)
Chr5 XP_002935875 (RefSeq)
macaque, rhesus TARBP1 712397 (Entrez Gene)
Chr1 XP_014981893 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory