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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
37961

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TSPOAP1 HGNC:16831 (HGNC)
9256 (Entrez Gene)
610764 (OMIM)
HGNC homology
Chr17 q22 Chr17:58301227-58329030 (-)
GRCh38.p7
O95153 (UniProt | EBI)
NM_004758 (RefSeq)
mouse Tspoap1 MGI:2450877 (MGI)
207777 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr11 52.21 cM Chr11:87760541-87785928 (+)
GRCm38
ENSMUSG00000034156 (Ensembl Gene Model)
ENSMUSP00000048063 (Ensembl)
ENSMUST00000039627 (Ensembl)
rat Tspoap1 287609 (Entrez Gene)
Chr10 q26 Q9JIR0 (UniProt | EBI)
chimpanzee TSPOAP1 455154 (Entrez Gene)
Chr17 XP_016788134 (RefSeq)
cattle TSPOAP1 518675 (Entrez Gene)
Chr19 XP_024836368 (RefSeq)
dog TSPOAP1 491112 (Entrez Gene)
Chr9 XP_013972169 (RefSeq)
chicken TSPOAP1 417469 (Entrez Gene)
Chr19 XP_024997797 (RefSeq)
frog, western clawed tspoap1 100379872 (Entrez Gene)
Chr2 XP_031752587 (RefSeq)
macaque, rhesus TSPOAP1 714301 (Entrez Gene)
Chr16 XP_028692118 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
01/21/2020
MGI 6.14
The Jackson Laboratory