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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
37944

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TRPC6 HGNC:12338 (HGNC)
7225 (Entrez Gene)
603652 (OMIM)
Chr11 q22.1 Chr11:101451564-101583956 (-)
GRCh38
Focal Segmental Glomerulosclerosis 2; FSGS2
Q9Y210 (UniProt | EBI)
NM_004621 (RefSeq)
mouse Trpc6 MGI:109523 (MGI)
22068 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 2.46 cM Chr9:8544196-8680565 (+)
GRCm38
ENSMUSG00000031997 (Ensembl Gene Model)
ENSMUSP00000057965 (Ensembl)
ENSMUST00000050433 (Ensembl)
rat Trpc6 89823 (Entrez Gene)
Chr8 q11 NP_446011 (RefSeq)
NM_053559 (RefSeq)
chimpanzee TRPC6 451503 (Entrez Gene)
Chr11 XP_001149632 (RefSeq)
rhesus macaque TRPM2 703611 (Entrez Gene)
Chr14 XP_002808133 (RefSeq)
cattle TRPC6 407151 (Entrez Gene)
Chr15 Q9MYW0 (UniProt | EBI)
NM_001166572 (RefSeq)
dog TRPC6 489435 (Entrez Gene)
Chr5 XP_546553 (RefSeq)
chicken TRPC6 418989 (Entrez Gene)
Chr1 XP_003640636 (RefSeq)
zebrafish LOC100333090 100333090 (Entrez Gene)
Chr18 XP_002665445 (RefSeq)
trpc6a 563989 (Entrez Gene)
Chr21 NP_001025453 (RefSeq)
NM_001030282 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory