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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human COL6A3 HGNC:2213 (HGNC)
1293 (Entrez Gene)
120250 (OMIM)
HGNC homology
Chr2 q37 Chr2:237324012-237414370 (-)
Bethlem Myopathy 1; BTHLM1
Dystonia 27; DYT27
Ullrich Congenital Muscular Dystrophy 1; UCMD1
P12111 (UniProt | EBI)
NM_004369 (RefSeq)
mouse Col6a3 MGI:88461 (MGI)
12835 (Entrez Gene)
Gene Tree
HGNC homology
Chr1 45.53 cM Chr1:90766860-90843971 (-)
Ullrich Congenital Muscular Dystrophy 1; UCMD1
OTTMUSG00000022359 (VEGA)
OTTMUSP00000062798 (VEGA)
OTTMUST00000053364 (VEGA)
rat Col6a3 367313 (Entrez Gene)
Chr9 q35-q36 XP_008765565 (RefSeq)
NM_001109008 (RefSeq)
chimpanzee COL6A3 460045 (Entrez Gene)
Chr2B XP_003309587 (RefSeq)
rhesus macaque COL6A3 694701 (Entrez Gene)
Chr12 XP_001084624 (RefSeq)
cattle COL6A3 530657 (Entrez Gene)
Chr3 XP_005198020 (RefSeq)
dog COL6A3 403582 (Entrez Gene)
Chr25 NP_001096685 (RefSeq)
NM_001103215 (RefSeq)
chicken COL6A3 396548 (Entrez Gene)
Chr7 P15989 (UniProt | EBI)
NM_205534 (RefSeq)
western clawed frog col6a3 100488707 (Entrez Gene)
ChrUN XP_012826677 (RefSeq)
zebrafish col6a3 556874 (Entrez Gene)
Chr9 XP_009302965 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.0
The Jackson Laboratory