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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
37917

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human COL6A3 HGNC:2213 (HGNC)
1293 (Entrez Gene)
120250 (OMIM)
Chr2 q37 Chr2:237324012-237414207 (-)
GRCh38
Bethlem Myopathy
Ullrich Congenital Muscular Dystrophy; UCMD
P12111 (UniProt | EBI)
NM_004369 (RefSeq)
mouse Col6a3 MGI:88461 (MGI)
12835 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 45.53 cM Chr1:90766860-90843952 (-)
GRCm38
Ullrich Congenital Muscular Dystrophy; UCMD
OTTMUSG00000022359 (VEGA)
OTTMUSP00000062798 (VEGA)
OTTMUST00000053364 (VEGA)
rat Col6a3 367313 (Entrez Gene)
Chr9 q35-q36 XP_003750780 (RefSeq)
NM_001109008 (RefSeq)
chimpanzee COL6A3 460045 (Entrez Gene)
Chr2B XP_001153479 (RefSeq)
rhesus macaque COL6A3 694701 (Entrez Gene)
Chr12 XP_001084624 (RefSeq)
cattle COL6A3 530657 (Entrez Gene)
Chr3 XP_002686616 (RefSeq)
dog COL6A3 403582 (Entrez Gene)
Chr25 NP_001096685 (RefSeq)
NM_001103215 (RefSeq)
chicken COL6A3 396548 (Entrez Gene)
Chr7 P15989 (UniProt | EBI)
NM_205534 (RefSeq)
zebrafish col6a3 556874 (Entrez Gene)
Chr9 XP_002663415 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory