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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
37902

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC28A1 HGNC:11001 (HGNC)
9154 (Entrez Gene)
606207 (OMIM)
HGNC homology
Chr15 q25.3 Chr15:84884351-84975649 (+)
GRCh38.p7
O00337 (UniProt | EBI)
NM_004213 (RefSeq)
mouse Slc28a1 MGI:3605073 (MGI)
434203 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr7 45.71 cM Chr7:81114799-81170416 (+)
GRCm38
ENSMUSG00000025726 (Ensembl Gene Model)
ENSMUSP00000026820 (Ensembl)
ENSMUST00000026820 (Ensembl)
rat Slc28a1 116642 (Entrez Gene)
Chr1 q31 Q62674 (UniProt | EBI)
NM_053863 (RefSeq)
chimpanzee SLC28A1 453611 (Entrez Gene)
Chr15 XP_009428017 (RefSeq)
cattle SLC28A1 511439 (Entrez Gene)
Chr21 NP_001032535 (RefSeq)
NM_001037458 (RefSeq)
dog SLC28A1 609634 (Entrez Gene)
Chr3 XP_013967925 (RefSeq)
macaque, rhesus SLC28A1 100426175 (Entrez Gene)
Chr7 XP_014998415 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory