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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
37901

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC6A5 HGNC:11051 (HGNC)
9152 (Entrez Gene)
604159 (OMIM)
Chr11 p15.1 Chr11:20599400-20655064 (+)
GRCh38
Hyperekplexia 3; HKPX3
Q9Y345 (UniProt | EBI)
NM_004211 (RefSeq)
mouse Slc6a5 MGI:105090 (MGI)
104245 (Entrez Gene)
Gene Tree
VISTA-Point
Chr7 31.71 cM Chr7:49910299-49959493 (+)
GRCm38
Hyperekplexia 3; HKPX3
104245 (NCBI Gene Model)
Q761V0 (UniProt | EBI)
NM_001146013 (RefSeq)
rat Slc6a5 171148 (Entrez Gene)
Chr1 q22 P58295 (UniProt | EBI)
NM_203334 (RefSeq)
chimpanzee SLC6A5 466470 (Entrez Gene)
Chr11 XP_521869 (RefSeq)
rhesus macaque SLC6A5 704703 (Entrez Gene)
Chr14 XP_001093080 (RefSeq)
cattle SLC6A5 528050 (Entrez Gene)
Chr29 XP_606459 (RefSeq)
dog SLC6A5 612095 (Entrez Gene)
Chr21 XP_005633814 (RefSeq)
chicken SLC6A5 422974 (Entrez Gene)
Chr5 XP_420906 (RefSeq)
western clawed frog slc6a5 100495275 (Entrez Gene)
ChrUN XP_002940014 (RefSeq)
zebrafish LOC100149162 100149162 (Entrez Gene)
Chr7 XP_001923544 (RefSeq)
slc6a5 494450 (Entrez Gene)
Chr7 NP_001009557 (RefSeq)
NM_001009557 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory