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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
37842

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PTCH2 HGNC:9586 (HGNC)
8643 (Entrez Gene)
603673 (OMIM)
Chr1 p34.1 Chr1:44819844-44842944 (-)
GRCh38
Medulloblastoma; MDB
Q9Y6C5 (UniProt | EBI)
NM_003738 (RefSeq)
mouse Ptch2 MGI:1095405 (MGI)
19207 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 53.41 cM Chr4:117096075-117116101 (+)
GRCm38
OTTMUSG00000009923 (VEGA)
OTTMUSP00000010515 (VEGA)
OTTMUST00000023049 (VEGA)
cattle PTCH2 507948 (Entrez Gene)
Chr3 XP_584648 (RefSeq)
dog PTCH2 482519 (Entrez Gene)
Chr15 XP_539636 (RefSeq)
chicken PTCH2 374187 (Entrez Gene)
Chr8 XP_422426 (RefSeq)
zebrafish ptch2 30181 (Entrez Gene)
Chr2 Q98864 (UniProt | EBI)
NM_130988 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory