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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
37727

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SMARCE1 HGNC:11109 (HGNC)
6605 (Entrez Gene)
603111 (OMIM)
Chr17 q21.2 Chr17:40627720-40647851 (-)
GRCh38
Meningioma, Familial, Susceptibility to
Q969G3 (UniProt | EBI)
NM_003079 (RefSeq)
mouse Smarce1 MGI:1927347 (MGI)
57376 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 62.92 cM Chr11:99209047-99231017 (-)
GRCm38
OTTMUSG00000006455 (VEGA)
OTTMUSP00000006855 (VEGA)
OTTMUST00000014750 (VEGA)
rat Smarce1 303518 (Entrez Gene)
Chr10 q32.1 Q56A18 (UniProt | EBI)
NM_001024993 (RefSeq)
chimpanzee SMARCE1 454655 (Entrez Gene)
Chr17 XP_001169953 (RefSeq)
rhesus macaque SMARCE1 701310 (Entrez Gene)
Chr16 NP_001248235 (RefSeq)
NM_001261306 (RefSeq)
cattle SMARCE1 540910 (Entrez Gene)
Chr19 NP_001092586 (RefSeq)
NM_001099116 (RefSeq)
dog SMARCE1 608250 (Entrez Gene)
Chr9 XP_851010 (RefSeq)
chicken SMARCE1 420047 (Entrez Gene)
Chr27 NP_001006335 (RefSeq)
NM_001006335 (RefSeq)
zebrafish smarce1 322248 (Entrez Gene)
Chr3 NP_958455 (RefSeq)
NM_201298 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory