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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
37718

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SDHD HGNC:10683 (HGNC)
6392 (Entrez Gene)
602690 (OMIM)
Chr11 q23 Chr11:112086824-112095801 (+)
GRCh38
Carcinoid Tumors, Intestinal
Cowden Syndrome 3; CWS3
Paraganglioma and Gastric Stromal Sarcoma
Paragangliomas 1; PGL1
Pheochromocytoma Pheochromocytoma, Susceptibility to
O14521 (UniProt | EBI)
NM_003002 (RefSeq)
mouse Sdhd MGI:1914175 (MGI)
66925 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 27.75 cM Chr9:50596340-50603849 (-)
GRCm38
66925 (NCBI Gene Model)
Q9CXV1 (UniProt | EBI)
NM_025848 (RefSeq)
rat Sdhd 363061 (Entrez Gene)
Chr8 q23 Q6PCT8 (UniProt | EBI)
NM_198788 (RefSeq)
chimpanzee SDHD 451547 (Entrez Gene)
Chr11 XP_508756 (RefSeq)
rhesus macaque SDHD 700693 (Entrez Gene)
Chr13 XP_001093794 (RefSeq)
SDHD 711326 (Entrez Gene)
Chr14 NP_001248692 (RefSeq)
NM_001261763 (RefSeq)
cattle SDHD 281481 (Entrez Gene)
Chr15 Q95123 (UniProt | EBI)
NM_174179 (RefSeq)
dog SDHD 479438 (Entrez Gene)
Chr5 XP_536573 (RefSeq)
chicken SDHD 419793 (Entrez Gene)
Chr24 Q5ZIS0 (UniProt | EBI)
NM_001006321 (RefSeq)
zebrafish sdhda 436762 (Entrez Gene)
Chr5 Q6DGM2 (UniProt | EBI)
NM_001002489 (RefSeq)
sdhdb 445500 (Entrez Gene)
Chr15 Q68FN7 (UniProt | EBI)
NM_001004004 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory