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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
37716

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SAT1 HGNC:10540 (HGNC)
6303 (Entrez Gene)
313020 (OMIM)
ChrX p22.1 ChrX:23783158-23786210 (+)
GRCh38
Keratosis Follicularis Spinulosa Decalvans, X-Linked; KFSDX
P21673 (UniProt | EBI)
NM_002970 (RefSeq)
mouse Sat1 MGI:98233 (MGI)
20229 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 72.38 cM ChrX:155213132-155216449 (-)
GRCm38
OTTMUSG00000019352 (VEGA)
OTTMUSP00000020875 (VEGA)
OTTMUST00000046202 (VEGA)
rat Sat1 302642 (Entrez Gene)
ChrX q22 NP_001007668 (RefSeq)
NM_001007667 (RefSeq)
chimpanzee SAT1 465538 (Entrez Gene)
ChrX XP_520976 (RefSeq)
rhesus macaque SAT1 697884 (Entrez Gene)
ChrX NP_001244591 (RefSeq)
NM_001257662 (RefSeq)
chicken SAT1 374006 (Entrez Gene)
Chr1 Q8AXL1 (UniProt | EBI)
NM_204186 (RefSeq)
zebrafish sat1a.1 565700 (Entrez Gene)
Chr5 NP_001025370 (RefSeq)
NM_001030199 (RefSeq)
sat1a.2 431716 (Entrez Gene)
Chr5 NP_001002169 (RefSeq)
NM_001002169 (RefSeq)
sat1b 567881 (Entrez Gene)
Chr24 NP_001087217 (RefSeq)
NM_001093748 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory