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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
377

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human OXCT1 HGNC:8527 (HGNC)
5019 (Entrez Gene)
601424 (OMIM)
Chr5 p13.1 Chr5:41730065-41870689 (-)
GRCh38
Succinyl-Coa:3-Oxoacid Coa Transferase Deficiency
P55809 (UniProt | EBI)
NM_000436 (RefSeq)
mouse Oxct1 MGI:1914291 (MGI)
67041 (Entrez Gene)
Gene Tree
VISTA-Point
Chr15 1.86 cM Chr15:4026383-4155344 (+)
GRCm38
OTTMUSG00000024748 (VEGA)
OTTMUSP00000029518 (VEGA)
OTTMUST00000060508 (VEGA)
rat Oxct1 690163 (Entrez Gene)
Chr2 q16 B2GV06 (UniProt | EBI)
NM_001127580 (RefSeq)
chimpanzee OXCT1 737468 (Entrez Gene)
Chr5 NP_001267310 (RefSeq)
NM_001280381 (RefSeq)
rhesus macaque OXCT1 716730 (Entrez Gene)
Chr14 XP_001114587 (RefSeq)
cattle OXCT1 535804 (Entrez Gene)
Chr20 NP_001069538 (RefSeq)
NM_001076070 (RefSeq)
dog OXCT1 479347 (Entrez Gene)
Chr4 XP_536487 (RefSeq)
chicken OXCT1 427190 (Entrez Gene)
ChrZ NP_001006578 (RefSeq)
NM_001006578 (RefSeq)
western clawed frog oxct1 493307 (Entrez Gene)
ChrUN NP_001007927 (RefSeq)
NM_001007926 (RefSeq)
zebrafish oxct1a 442923 (Entrez Gene)
Chr8 NP_001007292 (RefSeq)
NM_001007291 (RefSeq)
oxct1b 560273 (Entrez Gene)
Chr21 NP_001070618 (RefSeq)
NM_001077150 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory