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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
37667

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PRKCI HGNC:9404 (HGNC)
5584 (Entrez Gene)
600539 (OMIM)
PRKCI (MyGene.info)
HGNC homology
Chr3 q26.2 Chr3:170222432-170305982 (+)
GRCh38.p7
P41743 (UniProt | EBI)
NM_002740 (RefSeq)
mouse Prkci MGI:99260 (MGI)
18759 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr3 14.65 cM Chr3:30995747-31052959 (+)
GRCm38
abdominal obesity-metabolic syndrome
obesity
type 2 diabetes mellitus
OTTMUSG00000032732 (VEGA)
OTTMUSP00000043573 (VEGA)
OTTMUST00000081432 (VEGA)
rat Prkci 84006 (Entrez Gene)
Chr2 q24 F1M7Y5 (UniProt | EBI)
NM_032059 (RefSeq)
chimpanzee PRKCI 450143 (Entrez Gene)
Chr3 XP_016797782 (RefSeq)
cattle PRKCI 528478 (Entrez Gene)
Chr1 NP_001192884 (RefSeq)
NM_001205955 (RefSeq)
dog PRKCI 478686 (Entrez Gene)
Chr34 XP_022269846 (RefSeq)
chicken PRKCI 424991 (Entrez Gene)
Chr9 NP_001026490 (RefSeq)
NM_001031319 (RefSeq)
zebrafish prkci 117507 (Entrez Gene)
Chr2 Q90XF2 (UniProt | EBI)
NM_131855 (RefSeq)
frog, western clawed prkci 503517 (Entrez Gene)
Chr5 NP_001012707 (RefSeq)
NM_001012689 (RefSeq)
macaque, rhesus PRKCI 574352 (Entrez Gene)
Chr2 XP_014987119 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/05/2017
MGI 6.11
The Jackson Laboratory