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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
37659

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PPP1CB HGNC:9282 (HGNC)
5500 (Entrez Gene)
600590 (OMIM)
Chr2 p23 Chr2:28751748-28802940 (+)
GRCh38
P62140 (UniProt | EBI)
NM_002709 (RefSeq)
mouse Ppp1cb MGI:104871 (MGI)
19046 (Entrez Gene)
Gene Tree
VISTA-Point
Chr5 17.33 cM Chr5:32458974-32517433 (+)
GRCm38
OTTMUSG00000024328 (VEGA)
OTTMUSP00000029005 (VEGA)
OTTMUST00000059605 (VEGA)
rat Ppp1cb 25594 (Entrez Gene)
Chr6 q13 P62142 (UniProt | EBI)
NM_013065 (RefSeq)
chimpanzee PPP1CB 459118 (Entrez Gene)
Chr2A XP_001161723 (RefSeq)
rhesus macaque PPP1CB 703302 (Entrez Gene)
Chr13 NP_001247581 (RefSeq)
NM_001260652 (RefSeq)
cattle PPP1CB 538829 (Entrez Gene)
Chr11 Q3SWW9 (UniProt | EBI)
NM_001034653 (RefSeq)
dog PPP1CB 403558 (Entrez Gene)
Chr17 Q8MJ47 (UniProt | EBI)
NM_001003034 (RefSeq)
chicken PPP1CB 396019 (Entrez Gene)
Chr3 P62207 (UniProt | EBI)
NM_205122 (RefSeq)
zebrafish ppp1cb 100003223 (Entrez Gene)
Chr17 NP_001004527 (RefSeq)
NM_001004527 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory