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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human NR1H4 HGNC:7967 (HGNC)
9971 (Entrez Gene)
603826 (OMIM)
Farnesoid X receptor (MyGene.info)
HGNC homology
Chr12 q23.1 Chr12:100473773-100563867 (+)
Q96RI1 (UniProt | EBI)
NM_001206993 (RefSeq)
mouse Nr1h4 MGI:1352464 (MGI)
20186 (Entrez Gene)
Gene Tree
HGNC homology
Chr10 44.98 cM Chr10:89454234-89533585 (-)
hepatocellular carcinoma
OTTMUSG00000022710 (VEGA)
OTTMUSP00000026009 (VEGA)
OTTMUST00000054480 (VEGA)
rat Nr1h4 60351 (Entrez Gene)
Chr7 q13 Q62735 (UniProt | EBI)
NM_021745 (RefSeq)
chimpanzee NR1H4 452162 (Entrez Gene)
Chr12 XP_003952320 (RefSeq)
cattle NR1H4 540528 (Entrez Gene)
Chr5 Q3SZL0 (UniProt | EBI)
NM_001034708 (RefSeq)
dog NR1H4 612928 (Entrez Gene)
Chr15 XP_022259110 (RefSeq)
chicken NR1H4 373902 (Entrez Gene)
Chr1 NP_989444 (RefSeq)
NM_204113 (RefSeq)
zebrafish nr1h4 436847 (Entrez Gene)
Chr18 NP_001002574 (RefSeq)
NM_001002574 (RefSeq)
frog, western clawed nr1h4 100489310 (Entrez Gene)
Chr3 XP_002936891 (RefSeq)
macaque, rhesus NR1H4 695618 (Entrez Gene)
Chr11 XP_001090297 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory