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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
3760

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human NR1H4 HGNC:7967 (HGNC)
9971 (Entrez Gene)
603826 (OMIM)
Chr12 q23.1 Chr12:100473708-100563867 (+)
GRCh38
Q96RI1 (UniProt | EBI)
NM_005123 (RefSeq)
mouse Nr1h4 MGI:1352464 (MGI)
20186 (Entrez Gene)
Gene Tree
VISTA-Point
Chr10 44.98 cM Chr10:89454234-89533585 (-)
GRCm38
Hepatocellular Carcinoma
OTTMUSG00000022710 (VEGA)
OTTMUSP00000026009 (VEGA)
OTTMUST00000054480 (VEGA)
rat Nr1h4 60351 (Entrez Gene)
Chr7 q13 Q62735 (UniProt | EBI)
NM_021745 (RefSeq)
chimpanzee NR1H4 452162 (Entrez Gene)
Chr12 XP_509299 (RefSeq)
rhesus macaque NR1H4 695618 (Entrez Gene)
Chr11 XP_001090182 (RefSeq)
cattle NR1H4 540528 (Entrez Gene)
Chr5 Q3SZL0 (UniProt | EBI)
NM_001034708 (RefSeq)
dog NR1H4 612928 (Entrez Gene)
Chr15 XP_852959 (RefSeq)
chicken NR1H4 373902 (Entrez Gene)
Chr1 NP_989444 (RefSeq)
NM_204113 (RefSeq)
western clawed frog nr1h4 100489310 (Entrez Gene)
ChrUN XP_002936891 (RefSeq)
zebrafish nr1h4 436847 (Entrez Gene)
Chr18 NP_001002574 (RefSeq)
NM_001002574 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory