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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
3738

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human MSC HGNC:7321 (HGNC)
9242 (Entrez Gene)
603628 (OMIM)
MSC (gene) (MyGene.info)
HGNC homology
Chr8 q13.3 Chr8:71841542-71844496 (-)
GRCh38.p7
O60682 (UniProt | EBI)
NM_005098 (RefSeq)
mouse Msc MGI:1333884 (MGI)
17681 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr1 4.5 cM Chr1:14753346-14755992 (-)
GRCm38
ENSMUSG00000025930 (Ensembl Gene Model)
ENSMUSP00000027062 (Ensembl)
ENSMUST00000027062 (Ensembl)
rat Msc 312897 (Entrez Gene)
Chr5 q11 NP_001178683 (RefSeq)
NM_001191754 (RefSeq)
chimpanzee MSC 472790 (Entrez Gene)
Chr8 XP_016815055 (RefSeq)
cattle MSC 507407 (Entrez Gene)
Chr14 NP_001179075 (RefSeq)
NM_001192146 (RefSeq)
dog MSC 486992 (Entrez Gene)
Chr29 XP_544121 (RefSeq)
chicken MSC 420179 (Entrez Gene)
Chr2 XP_015138366 (RefSeq)
zebrafish msc 556396 (Entrez Gene)
Chr24 XP_684279 (RefSeq)
frog, western clawed msc 100124790 (Entrez Gene)
Chr6 NP_001096235 (RefSeq)
NM_001102765 (RefSeq)
macaque, rhesus MSC 694488 (Entrez Gene)
Chr8 XP_001082936 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/12/2019
MGI 6.14
The Jackson Laboratory