About   Help   FAQ
Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
3737

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
select all deselect all Go
human LGI1 HGNC:6572 (HGNC)
9211 (Entrez Gene)
604619 (OMIM)
Chr10 q24 Chr10:93757809-93798159 (+)
GRCh38
Epilepsy, Familial Temporal Lobe, 1; ETL1
O95970 (UniProt | EBI)
NM_005097 (RefSeq)
mouse Lgi1 MGI:1861691 (MGI)
56839 (Entrez Gene)
Gene Tree
VISTA-Point
Chr19 32.9 cM Chr19:38264782-38308939 (+)
GRCm38
Epilepsy, Familial Temporal Lobe, 1; ETL1
OTTMUSG00000016342 (VEGA)
OTTMUSP00000017555 (VEGA)
OTTMUST00000039287 (VEGA)
rat Lgi1 252892 (Entrez Gene)
Chr1 q53 Q8K4Y5 (UniProt | EBI)
NM_145769 (RefSeq)
chimpanzee LGI1 450619 (Entrez Gene)
Chr10 Q1EGL2 (UniProt | EBI)
NM_001071778 (RefSeq)
rhesus macaque LGI1 700520 (Entrez Gene)
Chr9 NP_001247986 (RefSeq)
NM_001261057 (RefSeq)
cattle LGI1 617080 (Entrez Gene)
Chr26 Q5E9T6 (UniProt | EBI)
NM_001046591 (RefSeq)
dog LGI1 477777 (Entrez Gene)
Chr28 XP_534971 (RefSeq)
chicken LGI1 423802 (Entrez Gene)
Chr6 NP_001038120 (RefSeq)
NM_001044655 (RefSeq)
zebrafish lgi1a 323011 (Entrez Gene)
Chr13 NP_955921 (RefSeq)
NM_199627 (RefSeq)
lgi1b 654829 (Entrez Gene)
Chr12 NP_001122241 (RefSeq)
NM_001128769 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
07/23/2014
MGI 5.19
The Jackson Laboratory