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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
37323

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TAP2 HGNC:44 (HGNC)
6891 (Entrez Gene)
170261 (OMIM)
Chr6 p21.3 Chr6:32821833-32838770 (-)
GRCh38
Bare Lymphocyte Syndrome, Type I
Q03519 (UniProt | EBI)
NM_000544 (RefSeq)
mouse Tap2 MGI:98484 (MGI)
21355 (Entrez Gene)
Gene Tree
VISTA-Point
Chr17 17.98 cM Chr17:34203527-34216321 (+)
GRCm38
OTTMUSG00000026436 (VEGA)
OTTMUSP00000032581 (VEGA)
OTTMUST00000065379 (VEGA)
rat Tap2 24812 (Entrez Gene)
Chr20 p12 P36372 (UniProt | EBI)
NM_032056 (RefSeq)
chimpanzee TAP2 746399 (Entrez Gene)
Chr6 XP_003311251 (RefSeq)
cattle LOC618733 618733 (Entrez Gene)
Chr23 NP_001040087 (RefSeq)
NM_001046622 (RefSeq)
TAP2 281586 (Entrez Gene)
Chr23 q12-q13 NP_776647 (RefSeq)
NM_174222 (RefSeq)
dog TAP2 474864 (Entrez Gene)
Chr12 NP_001271424 (RefSeq)
NM_001284495 (RefSeq)
chicken TAP2 427728 (Entrez Gene)
Chr16 NP_001092827 (RefSeq)
NM_001099357 (RefSeq)
western clawed frog tap2 100489020 (Entrez Gene)
ChrUN XP_002942649 (RefSeq)
zebrafish abcb3l1 368771 (Entrez Gene)
Chr19 NP_001006594 (RefSeq)
NM_001006594 (RefSeq)
si:dkey-57h18.2 556826 (Entrez Gene)
Chr12 XP_682981 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/26/2014
MGI 5.19
The Jackson Laboratory