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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
37298

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human XPA HGNC:12814 (HGNC)
7507 (Entrez Gene)
611153 (OMIM)
Chr9 q22.3 Chr9:97634451-97697409 (-)
GRCh38
Xeroderma Pigmentosum, Complementation Group A; XPA
P23025 (UniProt | EBI)
NM_000380 (RefSeq)
mouse Xpa MGI:99135 (MGI)
22590 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 24.49 cM Chr4:46155347-46196311 (-)
GRCm38
OTTMUSG00000006889 (VEGA)
OTTMUSP00000007310 (VEGA)
OTTMUST00000015907 (VEGA)
rat Xpa 298074 (Entrez Gene)
Chr5 q22 NP_001100126 (RefSeq)
NM_001106656 (RefSeq)
chimpanzee XPA 747191 (Entrez Gene)
Chr9 XP_001156167 (RefSeq)
rhesus macaque XPA 715705 (Entrez Gene)
Chr15 XP_001114093 (RefSeq)
cattle XPA 537958 (Entrez Gene)
Chr8 NP_001033770 (RefSeq)
NM_001038681 (RefSeq)
dog XPA 481623 (Entrez Gene)
Chr11 XP_538745 (RefSeq)
chicken XPA 395659 (Entrez Gene)
ChrZ P27089 (UniProt | EBI)
NM_204853 (RefSeq)
western clawed frog xpa 549490 (Entrez Gene)
ChrUN NP_001016736 (RefSeq)
NM_001016736 (RefSeq)
zebrafish xpa 393443 (Entrez Gene)
Chr1 NP_956765 (RefSeq)
NM_200471 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory