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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human VDR HGNC:12679 (HGNC)
7421 (Entrez Gene)
601769 (OMIM)
Calcitriol receptor (MyGene.info)
HGNC homology
Chr12 q13.11 Chr12:47841537-47905031 (-)
P11473 (UniProt | EBI)
NM_000376 (RefSeq)
mouse Vdr MGI:103076 (MGI)
22337 (Entrez Gene)
Gene Tree
HGNC homology
Chr15 53.85 cM Chr15:97854425-97910630 (-)
OTTMUSG00000026431 (VEGA)
OTTMUSP00000032572 (VEGA)
OTTMUST00000065367 (VEGA)
rat Vdr 24873 (Entrez Gene)
Chr7 q36 P13053 (UniProt | EBI)
NM_017058 (RefSeq)
chimpanzee VDR 451858 (Entrez Gene)
Chr12 XP_024203657 (RefSeq)
cattle VDR 533656 (Entrez Gene)
Chr5 Q28037 (UniProt | EBI)
NM_001167932 (RefSeq)
dog VDR 486588 (Entrez Gene)
Chr27 XP_005636975 (RefSeq)
chicken VDR 395988 (Entrez Gene)
Chr33 O42392 (UniProt | EBI)
NM_205098 (RefSeq)
zebrafish vdra 30076 (Entrez Gene)
Chr23 Q9PTN2 (UniProt | EBI)
NM_130919 (RefSeq)
vdrb 564511 (Entrez Gene)
Chr6 Q1L673 (UniProt | EBI)
NM_001159985 (RefSeq)
frog, western clawed vdr 100491661 (Entrez Gene)
Chr2 XP_002935703 (RefSeq)
macaque, rhesus VDR 706964 (Entrez Gene)
Chr11 XP_015007028 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.11
The Jackson Laboratory