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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC3A1 HGNC:11025 (HGNC)
6519 (Entrez Gene)
104614 (OMIM)
SLC3A1 (MyGene.info)
HGNC homology
Chr2 p21 Chr2:44275458-44320824 (+)
Q07837 (UniProt | EBI)
NM_000341 (RefSeq)
mouse Slc3a1 MGI:1195264 (MGI)
20532 (Entrez Gene)
Gene Tree
HGNC homology
Chr17 55.17 cM Chr17:85028347-85064241 (+)
20532 (NCBI Gene Model)
Q91WV7 (UniProt | EBI)
NM_009205 (RefSeq)
rat Slc3a1 29484 (Entrez Gene)
Chr6 q12 Q64319 (UniProt | EBI)
NM_017216 (RefSeq)
chimpanzee SLC3A1 459194 (Entrez Gene)
Chr2A XP_515443 (RefSeq)
cattle SLC3A1 535601 (Entrez Gene)
Chr11 NP_001029805 (RefSeq)
NM_001034633 (RefSeq)
dog SLC3A1 403700 (Entrez Gene)
Chr10 NP_001003109 (RefSeq)
NM_001003109 (RefSeq)
chicken SLC3A1 428569 (Entrez Gene)
Chr3 XP_004935427 (RefSeq)
zebrafish slc3a1 557757 (Entrez Gene)
Chr13 XP_685969 (RefSeq)
frog, western clawed slc3a1 780365 (Entrez Gene)
ChrUN NP_001072903 (RefSeq)
NM_001079435 (RefSeq)
macaque, rhesus SLC3A1 714035 (Entrez Gene)
Chr13 XP_014967760 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory