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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CLN3 HGNC:2074 (HGNC)
1201 (Entrez Gene)
607042 (OMIM)
CLN3 (MyGene.info)
HGNC homology
Chr16 p12.1 Chr16:28466653-28492302 (-)
neuronal ceroid lipofuscinosis 3
Q13286 (UniProt | EBI)
NM_000086 (RefSeq)
mouse Cln3 MGI:107537 (MGI)
12752 (Entrez Gene)
Gene Tree
HGNC homology
Chr7 69.16 cM Chr7:126571207-126585817 (-)
neuronal ceroid lipofuscinosis 3
OTTMUSG00000019900 (VEGA)
OTTMUSP00000021443 (VEGA)
OTTMUST00000047437 (VEGA)
rat Cln3 293485 (Entrez Gene)
Chr1 q36 NP_001006972 (RefSeq)
NM_001006971 (RefSeq)
cattle CLN3 504799 (Entrez Gene)
Chr25 NP_001068642 (RefSeq)
NM_001075174 (RefSeq)
dog CLN3 479794 (Entrez Gene)
Chr6 Q29611 (UniProt | EBI)
NM_001013417 (RefSeq)
zebrafish cln3 492340 (Entrez Gene)
Chr3 NP_001007307 (RefSeq)
NM_001007306 (RefSeq)
frog, western clawed cln3 100124328 (Entrez Gene)
ChrUN XP_004919826 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory