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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
3722

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human XBP1 HGNC:12801 (HGNC)
7494 (Entrez Gene)
194355 (OMIM)
Chr22 q12.1 Chr22:28794560-28800572 (-)
GRCh38
Major Affective Disorder 7; MAFD7
P17861 (UniProt | EBI)
NM_005080 (RefSeq)
mouse Xbp1 MGI:98970 (MGI)
22433 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 3.61 cM Chr11:5520659-5525893 (+)
GRCm38
OTTMUSG00000006338 (VEGA)
OTTMUSP00000006681 (VEGA)
OTTMUST00000014402 (VEGA)
rat Xbp1 289754 (Entrez Gene)
Chr14 q21 Q9R1S4 (UniProt | EBI)
NM_001004210 (RefSeq)
cattle XBP1 541236 (Entrez Gene)
Chr17 Q3SZZ2 (UniProt | EBI)
NM_001034727 (RefSeq)
dog XBP1 477532 (Entrez Gene)
Chr26 XP_854633 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory