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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
3716

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SIM2 HGNC:10883 (HGNC)
6493 (Entrez Gene)
600892 (OMIM)
SIM2 (MyGene.info)
HGNC homology
Chr21 q22.13 Chr21:36699117-36750219 (+)
GRCh38.p7
Q14190 (UniProt | EBI)
NM_009586 (RefSeq)
mouse Sim2 MGI:98307 (MGI)
20465 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr16 55.05 cM Chr16:94085260-94127032 (+)
GRCm38
ENSMUSG00000062713 (Ensembl Gene Model)
ENSMUSP00000072043 (Ensembl)
ENSMUST00000072182 (Ensembl)
rat Sim2 304071 (Entrez Gene)
Chr11 q11 NP_001100578 (RefSeq)
NM_001107108 (RefSeq)
chimpanzee SIM2 474107 (Entrez Gene)
Chr21 XP_001169453 (RefSeq)
cattle SIM2 100337422 (Entrez Gene)
Chr1 XP_015317699 (RefSeq)
dog SIM2 607987 (Entrez Gene)
Chr31 XP_022269030 (RefSeq)
chicken SIM2 418515 (Entrez Gene)
Chr1 XP_004934598 (RefSeq)
zebrafish sim2 114450 (Entrez Gene)
Chr3 NP_571911 (RefSeq)
NM_131836 (RefSeq)
frog, western clawed sim2 100492082 (Entrez Gene)
Chr2 XP_012813443 (RefSeq)
macaque, rhesus SIM2 697052 (Entrez Gene)
Chr3 XP_014988400 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/12/2017
MGI 6.10
The Jackson Laboratory