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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
371

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PAFAH1B1 HGNC:8574 (HGNC)
5048 (Entrez Gene)
601545 (OMIM)
Chr17 p13.3 Chr17:2593629-2685615 (+)
GRCh38
Lissencephaly 1; LIS1
P43034 (UniProt | EBI)
NM_000430 (RefSeq)
mouse Pafah1b1 MGI:109520 (MGI)
18472 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 45.76 cM Chr11:74673949-74724670 (-)
GRCm38
Lissencephaly 1; LIS1
Miller-Dieker Lissencephaly Syndrome; MDLS
OTTMUSG00000006184 (VEGA)
OTTMUSP00000006469 (VEGA)
OTTMUST00000013927 (VEGA)
rat Pafah1b1 83572 (Entrez Gene)
Chr10 q24 P63004 (UniProt | EBI)
NM_031763 (RefSeq)
chimpanzee PAFAH1B1 454422 (Entrez Gene)
Chr17 Q5IS43 (UniProt | EBI)
NM_001034091 (RefSeq)
rhesus macaque PAFAH1B1 574255 (Entrez Gene)
Chr16 NP_001245059 (RefSeq)
NM_001258130 (RefSeq)
cattle PAFAH1B1 282513 (Entrez Gene)
Chr19 P43033 (UniProt | EBI)
NM_174663 (RefSeq)
dog PAFAH1B1 480656 (Entrez Gene)
Chr9 XP_854482 (RefSeq)
chicken PAFAH1B1 374224 (Entrez Gene)
Chr19 Q9PTR5 (UniProt | EBI)
NM_204324 (RefSeq)
western clawed frog pafah1b1 403097 (Entrez Gene)
ChrUN Q6NZH4 (UniProt | EBI)
NM_205830 (RefSeq)
zebrafish pafah1b1a 394246 (Entrez Gene)
Chr15 Q7T394 (UniProt | EBI)
NM_201345 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory