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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
3698

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PRF1 HGNC:9360 (HGNC)
5551 (Entrez Gene)
170280 (OMIM)
Chr10 q22 Chr10:70597348-70602775 (-)
GRCh38
Hemophagocytic Lymphohistiocytosis, Familial, 2; FHL2
Lymphoma, Non-Hodgkin, Familial
P14222 (UniProt | EBI)
NM_005041 (RefSeq)
mouse Prf1 MGI:97551 (MGI)
18646 (Entrez Gene)
Gene Tree
VISTA-Point
Chr10 32.18 cM Chr10:61297836-61304263 (+)
GRCm38
Diabetes Mellitus, Insulin-Dependent; IDDM
Hemophagocytic Lymphohistiocytosis, Familial, 2; FHL2
Multiple Sclerosis, Susceptibility To; MS
18646 (NCBI Gene Model)
P10820 (UniProt | EBI)
NM_011073 (RefSeq)
rat Prf1 50669 (Entrez Gene)
Chr20 q11 P35763 (UniProt | EBI)
NM_017330 (RefSeq)
chimpanzee PRF1 450512 (Entrez Gene)
Chr10 XP_001171235 (RefSeq)
rhesus macaque PRF1 710241 (Entrez Gene)
Chr9 XP_001107909 (RefSeq)
cattle PRF1 369025 (Entrez Gene)
Chr28 NP_001137207 (RefSeq)
NM_001143735 (RefSeq)
dog PRF1 489030 (Entrez Gene)
Chr4 NP_001184111 (RefSeq)
NM_001197182 (RefSeq)
chicken LOC101750363 101750363 (Entrez Gene)
Chr17 XP_004945747 (RefSeq)
western clawed frog LOC100489175 100489175 (Entrez Gene)
ChrUN XP_002942088 (RefSeq)
LOC100489324 100489324 (Entrez Gene)
ChrUN XP_002942089 (RefSeq)
LOC100489487 100489487 (Entrez Gene)
ChrUN XP_002942090 (RefSeq)
LOC100491518 100491518 (Entrez Gene)
ChrUN XP_002942100 (RefSeq)
LOC100492973 100492973 (Entrez Gene)
ChrUN XP_002941527 (RefSeq)
LOC100493140 100493140 (Entrez Gene)
ChrUN XP_002941528 (RefSeq)
LOC100493300 100493300 (Entrez Gene)
ChrUN XP_002941529 (RefSeq)
LOC101732506 101732506 (Entrez Gene)
ChrUN XP_004918449 (RefSeq)
LOC101732838 101732838 (Entrez Gene)
ChrUN XP_004919588 (RefSeq)
zebrafish prf1.1 100000903 (Entrez Gene)
Chr3 XP_001341008 (RefSeq)
prf1.7 100535230 (Entrez Gene)
Chr19 XP_003200648 (RefSeq)
si:dkeyp-71f10.4 569443 (Entrez Gene)
Chr3 XP_697920 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory