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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
3658

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ATXN3 HGNC:7106 (HGNC)
4287 (Entrez Gene)
607047 (OMIM)
Chr14 q21 Chr14:92058552-92106621 (-)
GRCh38
Machado-Joseph Disease; MJD
P54252 (UniProt | EBI)
NM_004993 (RefSeq)
mouse Atxn3 MGI:1099442 (MGI)
110616 (Entrez Gene)
Gene Tree
VISTA-Point
Chr12 51.32 cM Chr12:101918901-101958246 (-)
GRCm38
OTTMUSG00000030696 (VEGA)
OTTMUSP00000039935 (VEGA)
OTTMUST00000075997 (VEGA)
rat Atxn3 60331 (Entrez Gene)
Chr6 q32 O35815 (UniProt | EBI)
NM_021702 (RefSeq)
chimpanzee ATXN3 738729 (Entrez Gene)
Chr14 XP_001146724 (RefSeq)
rhesus macaque LOC720515 720515 (Entrez Gene)
Chr7 XP_001116022 (RefSeq)
cattle ATXN3 790880 (Entrez Gene)
Chr21 NP_001092686 (RefSeq)
NM_001099216 (RefSeq)
dog ATXN3 480229 (Entrez Gene)
Chr8 XP_537352 (RefSeq)
chicken ATXN3 378424 (Entrez Gene)
Chr5 Q9W689 (UniProt | EBI)
NM_204357 (RefSeq)
western clawed frog atxn3 549143 (Entrez Gene)
ChrUN NP_001016389 (RefSeq)
NM_001016389 (RefSeq)
zebrafish atxn3 394079 (Entrez Gene)
Chr17 NP_957398 (RefSeq)
NM_201104 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/26/2014
MGI 5.19
The Jackson Laboratory