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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
36425

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CFAP43 HGNC:26684 (HGNC)
80217 (Entrez Gene)
617558 (OMIM)
HGNC homology
Chr10 q25.1 Chr10:104129888-104232363 (-)
GRCh38.p7
spermatogenic failure 19
Q8NDM7 (UniProt | EBI)
NM_025145 (RefSeq)
mouse Cfap43 MGI:1289258 (MGI)
100048534 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr19 40.41 cM Chr19:47735267-47837837 (-)
GRCm38
100048534 (NCBI Gene Model)
NP_081835 (RefSeq)
NM_027559 (RefSeq)
rat Cfap43 365476 (Entrez Gene)
Chr1 q54 XP_017460396 (RefSeq)
chimpanzee CFAP43 450718 (Entrez Gene)
Chr10 XP_016774779 (RefSeq)
cattle CFAP43 518801 (Entrez Gene)
Chr26 NP_001192778 (RefSeq)
NM_001205849 (RefSeq)
dog CFAP43 486877 (Entrez Gene)
Chr28 XP_013964614 (RefSeq)
chicken CFAP43 423879 (Entrez Gene)
Chr6 XP_015144201 (RefSeq)
zebrafish cfap43 568701 (Entrez Gene)
Chr13 XP_697139 (RefSeq)
frog, western clawed cfap43 100491900 (Entrez Gene)
Chr3 XP_017947699 (RefSeq)
macaque, rhesus CFAP43 716031 (Entrez Gene)
Chr9 XP_001106544 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory