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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
36321

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TIMP1 HGNC:11820 (HGNC)
7076 (Entrez Gene)
305370 (OMIM)
TIMP1 (MyGene.info)
HGNC homology
ChrX p11.3 ChrX:47582291-47586791 (+)
GRCh38.p7
P01033 (UniProt | EBI)
NM_003254 (RefSeq)
mouse Timp1 MGI:98752 (MGI)
21857 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
ChrX 16.38 cM ChrX:20870166-20874735 (+)
GRCm38
ENSMUSG00000001131 (Ensembl Gene Model)
ENSMUSP00000110999 (Ensembl)
ENSMUST00000115342 (Ensembl)
rat Timp1 116510 (Entrez Gene)
ChrX q11 P30120 (UniProt | EBI)
NM_053819 (RefSeq)
cattle TIMP1 282092 (Entrez Gene)
ChrX P20414 (UniProt | EBI)
NM_174471 (RefSeq)
dog TIMP1 403816 (Entrez Gene)
ChrX P81546 (UniProt | EBI)
NM_001003182 (RefSeq)
macaque, rhesus TIMP1 574348 (Entrez Gene)
ChrX Q95KL9 (UniProt | EBI)
NM_001032939 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
08/13/2019
MGI 6.14
The Jackson Laboratory