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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
36201

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SEMA3C HGNC:10725 (HGNC)
10512 (Entrez Gene)
602645 (OMIM)
Chr7 q21-q31 Chr7:80742538-80919351 (-)
GRCh38
Q99985 (UniProt | EBI)
NM_006379 (RefSeq)
mouse Sema3c MGI:107557 (MGI)
20348 (Entrez Gene)
Gene Tree
VISTA-Point
Chr5 7.99 cM Chr5:17574281-17730268 (+)
GRCm38
OTTMUSG00000035305 (VEGA)
OTTMUSP00000049340 (VEGA)
OTTMUST00000090077 (VEGA)
rat Sema3c 296787 (Entrez Gene)
Chr4 q11 NP_001100048 (RefSeq)
NM_001106578 (RefSeq)
chimpanzee SEMA3C 472427 (Entrez Gene)
Chr7 XP_001159729 (RefSeq)
rhesus macaque SEMA3C 708633 (Entrez Gene)
Chr3 NP_001247462 (RefSeq)
NM_001260533 (RefSeq)
cattle SEMA3C 512660 (Entrez Gene)
Chr4 A7MB70 (UniProt | EBI)
NM_001101082 (RefSeq)
dog SEMA3C 475930 (Entrez Gene)
Chr18 XP_533139 (RefSeq)
chicken SEMA3C 374090 (Entrez Gene)
Chr1 O42236 (UniProt | EBI)
NM_204243 (RefSeq)
western clawed frog sema3c 613059 (Entrez Gene)
ChrUN XP_002933132 (RefSeq)
zebrafish sema3c 553130 (Entrez Gene)
Chr4 XP_692847 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory