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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human VAPB HGNC:12649 (HGNC)
9217 (Entrez Gene)
605704 (OMIM)
VAPB (MyGene.info)
HGNC homology
Chr20 q13.32 Chr20:58389119-58451101 (+)
amyotrophic lateral sclerosis type 8
O95292 (UniProt | EBI)
NM_001195677 (RefSeq)
mouse Vapb MGI:1928744 (MGI)
56491 (Entrez Gene)
Gene Tree
HGNC homology
Chr2 97.37 cM Chr2:173737511-173784336 (+)
OTTMUSG00000016375 (VEGA)
OTTMUSP00000017608 (VEGA)
OTTMUST00000039412 (VEGA)
rat Vapb 60431 (Entrez Gene)
Chr3 q42 Q9Z269 (UniProt | EBI)
NM_021847 (RefSeq)
chimpanzee VAPB 469984 (Entrez Gene)
Chr20 XP_003317067 (RefSeq)
cattle VAPB 326580 (Entrez Gene)
Chr13 A2VDZ9 (UniProt | EBI)
NM_001082423 (RefSeq)
dog VAPB 477274 (Entrez Gene)
Chr24 XP_005635283 (RefSeq)
chicken VAPB 419317 (Entrez Gene)
Chr20 NP_001006296 (RefSeq)
NM_001006296 (RefSeq)
zebrafish vapb 323628 (Entrez Gene)
Chr6 NP_997812 (RefSeq)
NM_212647 (RefSeq)
frog, western clawed vapb 394500 (Entrez Gene)
ChrUN NP_988905 (RefSeq)
NM_203574 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory