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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
36154

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RAB1A HGNC:9758 (HGNC)
5861 (Entrez Gene)
179508 (OMIM)
Chr2 p14 Chr2:65086854-65130301 (-)
GRCh38
P62820 (UniProt | EBI)
NM_004161 (RefSeq)
mouse Rab1 MGI:97842 (MGI)
19324 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 12.92 cM Chr11:20201432-20226856 (+)
GRCm38
OTTMUSG00000005223 (VEGA)
OTTMUSP00000005406 (VEGA)
OTTMUST00000011651 (VEGA)
rat Rab1a 81754 (Entrez Gene)
Chr14 q22 Q6NYB7 (UniProt | EBI)
NM_031090 (RefSeq)
chimpanzee RAB1A 459280 (Entrez Gene)
Chr2A XP_530454 (RefSeq)
rhesus macaque RAB1A 696962 (Entrez Gene)
Chr13 NP_001244201 (RefSeq)
NM_001257272 (RefSeq)
dog RAB1A 403774 (Entrez Gene)
Chr10 P62822 (UniProt | EBI)
NM_001003153 (RefSeq)
chicken RAB1A 421273 (Entrez Gene)
Chr3 NP_001257591 (RefSeq)
NM_001270662 (RefSeq)
western clawed frog rab1a 448007 (Entrez Gene)
ChrUN NP_001004787 (RefSeq)
NM_001004787 (RefSeq)
zebrafish rab1a 368883 (Entrez Gene)
Chr13 NP_001007162 (RefSeq)
NM_001007161 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory