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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
35476

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TSEN54 HGNC:27561 (HGNC)
283989 (Entrez Gene)
608755 (OMIM)
Chr17 q25.1 Chr17:75515707-75524740 (+)
GRCh38
Pontocerebellar Hypoplasia, Type 2A; PCH2A
Pontocerebellar Hypoplasia, Type 4; PCH4
Q7Z6J9 (UniProt | EBI)
NM_207346 (RefSeq)
mouse Tsen54 MGI:1923515 (MGI)
76265 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 80.91 cM Chr11:115814724-115823094 (+)
GRCm38
OTTMUSG00000003539 (VEGA)
OTTMUSP00000003671 (VEGA)
OTTMUST00000007589 (VEGA)
rat Tsen54 690308 (Entrez Gene)
Chr10 q32.3 NP_001103046 (RefSeq)
NM_001109576 (RefSeq)
chimpanzee TSEN54 737516 (Entrez Gene)
Chr17 XP_001143195 (RefSeq)
rhesus macaque TSEN54 702604 (Entrez Gene)
Chr16 NP_001248477 (RefSeq)
NM_001261548 (RefSeq)
cattle TSEN54 511091 (Entrez Gene)
Chr19 NP_001192620 (RefSeq)
NM_001205691 (RefSeq)
dog TSEN54 483315 (Entrez Gene)
Chr9 XP_540434 (RefSeq)
chicken TSEN54 422126 (Entrez Gene)
Chr18 XP_420129 (RefSeq)
zebrafish tsen54 553550 (Entrez Gene)
Chr3 NP_001018365 (RefSeq)
NM_001020529 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory