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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
35455

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CCDC18 HGNC:30370 (HGNC)
343099 (Entrez Gene)
HGNC homology
Chr1 p22.1 Chr1:93179802-93279037 (+)
GRCh38.p7
Q5T9S5 (UniProt | EBI)
NM_001306076 (RefSeq)
mouse Ccdc18 MGI:1922974 (MGI)
73254 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr5 52.55 cM Chr5:108132799-108232951 (+)
GRCm38
73254 (NCBI Gene Model)
Q640L5 (UniProt | EBI)
NM_028481 (RefSeq)
rat Ccdc18 305628 (Entrez Gene)
Chr14 p22 XP_006221702 (RefSeq)
chimpanzee CCDC18 457028 (Entrez Gene)
Chr1 XP_016777975 (RefSeq)
cattle CCDC18 540863 (Entrez Gene)
Chr3 XP_024845839 (RefSeq)
dog CCDC18 479946 (Entrez Gene)
Chr6 XP_022276167 (RefSeq)
chicken CCDC18 424497 (Entrez Gene)
Chr8 NP_001238963 (RefSeq)
NM_001252034 (RefSeq)
zebrafish ccdc18 564276 (Entrez Gene)
Chr2 NP_001352065 (RefSeq)
NM_001365136 (RefSeq)
frog, western clawed ccdc18 100379788 (Entrez Gene)
Chr4 XP_002933840 (RefSeq)
macaque, rhesus CCDC18 713129 (Entrez Gene)
Chr1 XP_015000497 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory