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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HPS5 HGNC:17022 (HGNC)
11234 (Entrez Gene)
607521 (OMIM)
HPS5 (MyGene.info)
HGNC homology
Chr11 p15.1 Chr11:18278670-18322498 (-)
Hermansky-Pudlak syndrome 5
Q9UPZ3 (UniProt | EBI)
NM_007216 (RefSeq)
mouse Hps5 MGI:2180307 (MGI)
246694 (Entrez Gene)
Gene Tree
HGNC homology
Chr7 30.56 cM Chr7:46760466-46796064 (-)
Hermansky-Pudlak syndrome 5
platelet storage pool deficiency
OTTMUSG00000024390 (VEGA)
OTTMUSP00000029103 (VEGA)
OTTMUST00000059781 (VEGA)
rat Hps5 308598 (Entrez Gene)
Chr1 q22 NP_001129084 (RefSeq)
NM_001135612 (RefSeq)
chimpanzee HPS5 451060 (Entrez Gene)
Chr11 XP_009458315 (RefSeq)
cattle HPS5 510165 (Entrez Gene)
Chr29 NP_001193065 (RefSeq)
NM_001206136 (RefSeq)
dog HPS5 485404 (Entrez Gene)
Chr21 XP_005633789 (RefSeq)
chicken HPS5 423079 (Entrez Gene)
Chr5 XP_015142148 (RefSeq)
zebrafish hps5 100037388 (Entrez Gene)
Chr25 NP_001083008 (RefSeq)
NM_001089539 (RefSeq)
frog, western clawed hps5 100036709 (Entrez Gene)
Chr1 NP_001090726 (RefSeq)
NM_001097257 (RefSeq)
macaque, rhesus HPS5 694434 (Entrez Gene)
Chr14 XP_014970168 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.11
The Jackson Laboratory