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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human LRAT HGNC:6685 (HGNC)
9227 (Entrez Gene)
604863 (OMIM)
HGNC homology
Chr4 q32.1 Chr4:154740841-154753119 (+)
Leber congenital amaurosis 14
retinitis pigmentosa
O95237 (UniProt | EBI)
NM_001301645 (RefSeq)
mouse Lrat MGI:1891259 (MGI)
79235 (Entrez Gene)
Gene Tree
HGNC homology
Chr3 36.81 cM Chr3:82892579-82903973 (-)
Leber congenital amaurosis 14
OTTMUSG00000029021 (VEGA)
OTTMUSP00000036977 (VEGA)
OTTMUST00000072001 (VEGA)
rat Lrat 64047 (Entrez Gene)
Chr2 q34 Q9JI61 (UniProt | EBI)
NM_022280 (RefSeq)
chimpanzee LRAT 471328 (Entrez Gene)
Chr4 XP_001139032 (RefSeq)
cattle LRAT 281285 (Entrez Gene)
Chr17 Q9BGL2 (UniProt | EBI)
NM_177503 (RefSeq)
dog LRAT 482660 (Entrez Gene)
Chr15 XP_022259240 (RefSeq)
chicken LRAT 422403 (Entrez Gene)
Chr4 XP_420371 (RefSeq)
zebrafish lrata 553239 (Entrez Gene)
Chr1 NP_001191060 (RefSeq)
NM_001204131 (RefSeq)
lratb.1 553501 (Entrez Gene)
Chr1 XP_021331631 (RefSeq)
frog, western clawed LOC100485002 100485002 (Entrez Gene)
lrat 394746 (Entrez Gene)
Chr1 NP_989141 (RefSeq)
NM_203810 (RefSeq)
macaque, rhesus LRAT 698871 (Entrez Gene)
Chr5 NP_001180868 (RefSeq)
NM_001193939 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory