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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC33A1 HGNC:95 (HGNC)
9197 (Entrez Gene)
603690 (OMIM)
SLC33A1 (gene) (MyGene.info)
HGNC homology
Chr3 q25.31 Chr3:155826511-155854459 (-)
hereditary spastic paraplegia 42
O00400 (UniProt | EBI)
NM_001190992 (RefSeq)
mouse Slc33a1 MGI:1332247 (MGI)
11416 (Entrez Gene)
Gene Tree
HGNC homology
Chr3 30.08 cM Chr3:63933507-63964768 (-)
OTTMUSG00000026586 (VEGA)
OTTMUSP00000032828 (VEGA)
OTTMUST00000065779 (VEGA)
rat Slc33a1 64018 (Entrez Gene)
Chr2 q31 Q6AYY8 (UniProt | EBI)
NM_022252 (RefSeq)
chimpanzee SLC33A1 460796 (Entrez Gene)
Chr3 XP_516831 (RefSeq)
cattle SLC33A1 517797 (Entrez Gene)
Chr1 NP_001069226 (RefSeq)
NM_001075758 (RefSeq)
dog SLC33A1 485724 (Entrez Gene)
Chr23 XP_022264487 (RefSeq)
chicken SLC33A1 425029 (Entrez Gene)
Chr9 XP_025009544 (RefSeq)
zebrafish slc33a1 394083 (Entrez Gene)
Chr18 NP_957402 (RefSeq)
NM_201108 (RefSeq)
frog, western clawed slc33a1 100494967 (Entrez Gene)
Chr5 XP_002933291 (RefSeq)
macaque, rhesus SLC33A1 721420 (Entrez Gene)
Chr2 XP_014987346 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory