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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human AP4M1 HGNC:574 (HGNC)
9179 (Entrez Gene)
602296 (OMIM)
AP4M1 (MyGene.info)
HGNC homology
Chr7 q22.1 Chr7:100101413-100107180 (+)
hereditary spastic paraplegia 50
O00189 (UniProt | EBI)
NM_004722 (RefSeq)
mouse Ap4m1 MGI:1337063 (MGI)
11781 (Entrez Gene)
Gene Tree
HGNC homology
Chr5 76.98 cM Chr5:138172002-138180429 (+)
OTTMUSG00000022671 (VEGA)
OTTMUSP00000025920 (VEGA)
OTTMUST00000054326 (VEGA)
rat Ap4m1 304344 (Entrez Gene)
Chr12 q11 Q2PWT8 (UniProt | EBI)
NM_001037977 (RefSeq)
chimpanzee AP4M1 738038 (Entrez Gene)
Chr7 XP_001145485 (RefSeq)
cattle AP4M1 768040 (Entrez Gene)
Chr25 Q29RY8 (UniProt | EBI)
NM_001077099 (RefSeq)
dog AP4M1 489847 (Entrez Gene)
Chr6 E2RED8 (UniProt | EBI)
zebrafish ap4m1 436945 (Entrez Gene)
Chr10 NP_001002672 (RefSeq)
NM_001002672 (RefSeq)
frog, western clawed ap4m1 100127610 (Entrez Gene)
ChrUN NP_001106436 (RefSeq)
NM_001112965 (RefSeq)
macaque, rhesus AP4M1 710944 (Entrez Gene)
Chr3 XP_014989914 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory