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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
3467

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human AP4M1 HGNC:574 (HGNC)
9179 (Entrez Gene)
602296 (OMIM)
Chr7 q22.1 Chr7:100101490-100107180 (+)
GRCh38
Spastic Paraplegia 50, Autosomal Recessive; SPG50
O00189 (UniProt | EBI)
NM_004722 (RefSeq)
mouse Ap4m1 MGI:1337063 (MGI)
11781 (Entrez Gene)
Gene Tree
VISTA-Point
Chr5 76.98 cM Chr5:138172002-138178708 (+)
GRCm38
OTTMUSG00000022671 (VEGA)
OTTMUSP00000025920 (VEGA)
OTTMUST00000054326 (VEGA)
rat Ap4m1 304344 (Entrez Gene)
Chr12 q11 Q2PWT8 (UniProt | EBI)
NM_001037977 (RefSeq)
chimpanzee AP4M1 738038 (Entrez Gene)
Chr7 XP_001145485 (RefSeq)
rhesus macaque AP4M1 710944 (Entrez Gene)
Chr3 XP_001101970 (RefSeq)
cattle AP4M1 768040 (Entrez Gene)
Chr25 Q29RY8 (UniProt | EBI)
NM_001077099 (RefSeq)
dog AP4M1 489847 (Entrez Gene)
Chr6 XP_546965 (RefSeq)
western clawed frog ap4m1 100127610 (Entrez Gene)
ChrUN NP_001106436 (RefSeq)
NM_001112965 (RefSeq)
zebrafish ap4m1 436945 (Entrez Gene)
Chr10 NP_001002672 (RefSeq)
NM_001002672 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory