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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
3456

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SYNGR1 HGNC:11498 (HGNC)
9145 (Entrez Gene)
603925 (OMIM)
SYNGR1 (MyGene.info)
HGNC homology
Chr22 q13.1 Chr22:39349949-39385588 (+)
GRCh38.p7
O43759 (UniProt | EBI)
NM_145738 (RefSeq)
mouse Syngr1 MGI:1328323 (MGI)
20972 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr15 37.85 cM Chr15:80091334-80119501 (+)
GRCm38
20972 (NCBI Gene Model)
O55100 (UniProt | EBI)
NM_207708 (RefSeq)
rat Syngr1 29205 (Entrez Gene)
Chr7 q34 Q62876 (UniProt | EBI)
NM_019166 (RefSeq)
chicken SYNGR1 418015 (Entrez Gene)
Chr1 NP_001239207 (RefSeq)
NM_001252278 (RefSeq)
zebrafish syngr1a 450047 (Entrez Gene)
Chr3 NP_001006067 (RefSeq)
NM_001006067 (RefSeq)
frog, western clawed syngr1 548949 (Entrez Gene)
Chr4 NP_001016195 (RefSeq)
NM_001016195 (RefSeq)
macaque, rhesus SYNGR1 100427479 (Entrez Gene)
Chr10 NP_001253483 (RefSeq)
NM_001266554 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/05/2019
MGI 6.14
The Jackson Laboratory