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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
3421

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human BAP1 HGNC:950 (HGNC)
8314 (Entrez Gene)
603089 (OMIM)
Chr3 p21.31-p21.2 Chr3:52401004-52410105 (-)
GRCh38
Tumor Predisposition Syndrome; TPDS
Q92560 (UniProt | EBI)
NM_004656 (RefSeq)
mouse Bap1 MGI:1206586 (MGI)
104416 (Entrez Gene)
Gene Tree
VISTA-Point
Chr14 19.09 cM Chr14:31251450-31259944 (+)
GRCm38
Myelodysplastic Syndrome; MDS
OTTMUSG00000048112 (VEGA)
OTTMUSP00000067451 (VEGA)
OTTMUST00000123598 (VEGA)
rat Bap1 306257 (Entrez Gene)
Chr16 p16 D3ZHS6 (UniProt | EBI)
NM_001107292 (RefSeq)
chimpanzee BAP1 460426 (Entrez Gene)
Chr3 XP_001171970 (RefSeq)
rhesus macaque BAP1 697221 (Entrez Gene)
Chr2 NP_001248307 (RefSeq)
NM_001261378 (RefSeq)
cattle BAP1 100124510 (Entrez Gene)
Chr22 A2VDM8 (UniProt | EBI)
NM_001102549 (RefSeq)
dog BAP1 484737 (Entrez Gene)
Chr20 XP_541853 (RefSeq)
chicken BAP1 415944 (Entrez Gene)
Chr12 Q5F3N6 (UniProt | EBI)
NM_001030590 (RefSeq)
western clawed frog bap1 493568 (Entrez Gene)
ChrUN Q66JB6 (UniProt | EBI)
NM_001008205 (RefSeq)
zebrafish bap1 558885 (Entrez Gene)
Chr22 A1L2G3 (UniProt | EBI)
NM_001163837 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory