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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
34137

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SSC4D HGNC:14461 (HGNC)
136853 (Entrez Gene)
607639 (OMIM)
HGNC homology
Chr7 q11.23 Chr7:76389329-76410025 (-)
GRCh38.p7
Q8WTU2 (UniProt | EBI)
NM_080744 (RefSeq)
mouse Ssc4d MGI:1924709 (MGI)
109267 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr5 75.6 cM Chr5:135960220-135974535 (-)
GRCm38
109267 (NCBI Gene Model)
A1L0T3 (UniProt | EBI)
NM_001160366 (RefSeq)
rat Ssc4d 304401 (Entrez Gene)
Chr12 q12 XP_017453990 (RefSeq)
chimpanzee SSC4D 744680 (Entrez Gene)
Chr7 XP_016814292 (RefSeq)
cattle SSC4D 539182 (Entrez Gene)
Chr25 NP_001179121 (RefSeq)
NM_001192192 (RefSeq)
dog SSC4D 608018 (Entrez Gene)
Chr6 XP_038523872 (RefSeq)
chicken SSC4D 771260 (Entrez Gene)
Chr19 XP_015151365 (RefSeq)
zebrafish LOC100331436 100331436 (Entrez Gene)
Chr5 XP_021332050 (RefSeq)
frog, western clawed ssc4d 100488350 (Entrez Gene)
Chr2 XP_031752817 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
04/13/2021
MGI 6.16
The Jackson Laboratory